List/Grid Tag Archives: featured
DiffSplice, tool to detect the differential splicing events with RNA-seq
The RNA transcriptome varies in response to cellular differentiation as well as environmental factors, and can be characterized by the
Incoming search terms:RNA seqrna sequencingdiffsplicerna-seq ...
Biocondutor Packages for Analyzing Chip-seq Data
BayesPeak - Bayesian Analysis of ChIP-seq Data, This package is an implementation of the BayesPeak algorithm for peak-calling in ChIP-seq data.
Incoming search terms:Peakseqchip-seq ...
Nebula – a web-server for advanced ChIP-seq data analysis.
Nebula is for both bioinformaticians and biologists. It is based on the Galaxy open source framework. Galaxy already
Incoming search terms:chip-seq analysis pipelinechip seq analysis ...
easyRNASeq: a bioconductor package for processing RNA-Seq data.
RNA sequencing is becoming a standard for expression profiling experiments and many tools have been developed in the past few years to analyze RNA-Seq
Incoming search terms:r bioconductor ...
Tools to remove adapter sequences from next-generation sequencing data
List of various tools to detect and trim adapter sequences from sequencing data.
Cutadapt
Cutadapt removes adapter sequences from high-throughput sequencing data. This is usually necessary ...
deepBlockAlign: a tool for aligning RNA-seq profiles of read block patterns
deepBlockAlign is a tool for the alignment of two RNA-seq read patterns. The analysis starts from closely spaced blocks of
Incoming search terms:deepblockalign: a tool for aligning ...
