List/Grid Bioinformatics
BEDOPS: high-performance genomic feature operations
BEDOPS, a software suite for common genomic analysis tasks which offers improved flexibility, scalability and execution time characteristics over previously
Incoming search terms:sam ...
Tools to remove adapter sequences from next-generation sequencing data
List of various tools to detect and trim adapter sequences from sequencing data.
Cutadapt
Cutadapt removes adapter sequences from high-throughput sequencing data. This is usually necessary ...
The Sequence alignment/map (SAM) format and SAMtools
SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing
Incoming search terms:The Sequence alignment/map (SAM)format ...
BEDTools: a flexible suite of utilities for comparing genomic features
Bedtools is a new software suite for the comparison, manipulation and annotation of genomic features in Browser Extensible Data (BED) and General
Incoming search terms:bedtool groupbygenomecoveragebed ...