List/Grid Splice Junction Mapping

kissplice

KISSPLICE: de-novo calling alternative splicing events from RNA-seq data

kisSplice calls splicing events from one to n sets of NGS/HTS reads. It takes as input one to n sets of NGS raw reads or an already created de-Bruijn graph. Incoming search terms:KISSPLICEKISSPLICE ...
passion

PASSion: a pattern growth algorithm based pileline for splice site detection in paired-end RNA-Seq data

PASSion uses the mapped read in a pair as anchor and then uses a high resolution algorithm, pattern growth, to remap the proximal and distal fragments of the Incoming search terms:passion ...
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