List/Grid RNA-seq
DiffSplice, tool to detect the differential splicing events with RNA-seq
The RNA transcriptome varies in response to cellular differentiation as well as environmental factors, and can be characterized by the
Incoming search terms:RNA seqrna sequencingdiffsplicerna-seq ...
Bioconductor R packages for the analysis of RNA-seq Data
ArrayExpressHTS – ArrayExpress High Throughput Sequencing Processing Pipeline. RNA-Seq processing pipeline for public ArrayExpress experiments or local
Incoming search terms:RNA-seqr ...
De novo Transcriptome Assembly in the Wing Polymorphic Salt Marsh Beetle Pogonus chalceus
The salt marsh beetle Pogonus chalceus represents a unique opportunity to understand and study the origin and evolution
Incoming search terms:wing studyRNA-seq transcriptome assembly ...
Tbrowse- HTML5 Transcriptome Browser
tbrowse is HTML5/javascript based browser designed specifically for visualizing RNA-seq results. This project aims to
Incoming search terms:cloud-enabled pipelinebioconductor html5html5 ...
easyRNASeq: a bioconductor package for processing RNA-Seq data.
RNA sequencing is becoming a standard for expression profiling experiments and many tools have been developed in the past few years to analyze RNA-Seq
Incoming search terms:r bioconductor ...
Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
Research published in the July 22 issue of Nature Biotechnology, shows for the first time that a novel genomic sequencing
Incoming search terms:full-length mrna-seq from single-cell ...
SpliceSeq: A Resource for Analysis and Visualization of RNA-Seq Data on Alternative Splicing and Its Functional Impacts.
SpliceSeq is a resource for RNA-Seq data that provides a clear view of alternative splicing and identifies potential
Incoming search terms:chip-seq and alternative splicingvisualize ...
RNA-seq analysis of the Caenorhabditis briggsae transcriptome
In this paper, the authors have reannotated the genome of Caenorhabditis briggsae, the best studied sister species of the model organism Caenorhabditis elegans. First, they applied ...
Aldex: ANOVA-like RNA-seq analysis
Adlex is an RNA-seq tool that uses the Dirichlet distribution and a transformation to identify genes that exhibit small within-
Incoming search terms:Rna-seq anovaANOVA RNA-seqaldex ...
OSA – a super-fast and accurate alignment tool for RNA-Seq data
OSA (Omicsoft Sequence Aligner), a super-fast and accurate alignment tool for RNA-Seq data. Benchmarked with existing methods, OSA improves mapping
Incoming search terms:osa a fast ...
